GEO Data Sources#
Biolearn supports a number of useful DNA methylation data sets from GEO
ID |
Title |
Format |
Samples |
Age Present |
Sex Present |
|---|---|---|---|---|---|
FACS validation dataset: An optimized library for reference-… |
Unknown |
6 |
Yes |
Yes |
|
FlowSorted.Blood.EPIC: An optimized library for reference-ba… |
Unknown |
49 |
Yes |
Yes |
|
Genome-wide Methylation Profiles Reveal Quantitative Views o… |
Illumina450k |
656 |
Yes |
Yes |
|
Genome wide DNA methylation profiling of United Kingdom Ovar… |
Illumina27k |
540 |
Yes |
No |
|
Methylome Analysis and Epigenetic Changes Associated with Me… |
Illumina450k |
329 |
Yes |
Yes |
|
Differential DNA methylation in Rheumatoid arthritis |
Illumina450k |
689 |
Yes |
Yes |
|
Blood DNA methylation profiles in a Dutch population |
Illumina450k |
95 |
Yes |
Yes |
|
EPIC-Italy at HuGeF |
Illumina450k |
845 |
Yes |
Yes |
|
Many obesity-associated SNPs strongly associate with DNA met… |
Illumina450k |
355 |
Yes |
Yes |
|
Aging-associated DNA methylation changes in middle-aged indi… |
Illumina450k |
184 |
Yes |
No |
|
Methylation Profiling of Blood DNA from Healthy Children |
Illumina450k |
192 |
No |
No |
|
DNA methylation profiles of human blood samples from a sever… |
Illumina450k |
113 |
Yes |
Yes |
|
DNA methylomes of Newborns and Nonagenarians |
Illumina450k |
40 |
Yes |
No |
|
Identification of a DNA methylation signature in blood from … |
Illumina450k |
87 |
Yes |
Yes |
|
Methylation data from stored peripheral blood leukocytes fro… |
Illumina450k |
946 |
Yes |
Yes |
|
DNA Methylation (EPIC) from the Grady Trauma Project |
IlluminaEPIC |
795 |
Yes |
Yes |
|
RNASeq whole blood of Dutch 500FG cohort |
IlluminaHiSeq2500 |
100 |
Yes |
Yes |
|
Deep sequencing of endogenous mRNA from Homo sapiens from fo… |
IlluminaHiSeq2500 |
62 |
No |
No |