Examples#
Warning
If you want to run the examples, make sure you execute them in a directory where you have write permissions, or you copy the examples into such a directory. If you install biolean manually, make sure you have followed the instructions.
Omics Biomarker Examples#
Plots results of running omics based biomarker models functions. Includes methylation and transcriptomic data.
Composite Biomarkers Examples#
Plot survival curves based on clocks using data from standard blood tests
Challenge Submission Examples#
Generate submissions for the biomarkers of aging challenge

Building a competition submission using an existing model
Deconvolution Examples#
Plots results of running deconvolution on dataset with known cell proportions
Additional Visualization Examples#
This document showcases functions in visualize.py for visualizing quality control results, DNA methylation, and aging clock/model predictions